Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015948050.1_cds_XP_016489440.1_79961
CDS Infomation

[gene=LOC107809351] [db_xref=GeneID:107809351] [protein=CSC1-like protein RXW8] [partial=3'] [protein_id=XP_016489440.1] [location=join(25176..25456,26304..26450,26859..26922,27063..27272,28000..28176,28605..28903,29273..29543,30381..>30659)] [gbkey=CDS]
Sequence

ATGAAGCTAGCTGCTCTGTTGACTTCTGCTGGCGTCAATACTGCAGTGTGTGTAGTGTTG
TTCTCCTTGTATTCGGTTTTAAGGAAACAACCGAGCTTTGTAAATGTTTACTTTGGCGCG
AAGATTGCTCAAGTACGAGCAAGACAACAGGATGCCTTTCGCTTTGATCGATTTGTACCT
TCTCCAAGTTGGATCCTCAAGGCATGGGAGACATCTGATGAAGAAATAAGTGCTACTGGG
GGATTGGATGCAGTAGTATTTGTGCGGATGATTGTTTTCAGTTTCCGAATATTCTCCATT
GCAGCTATCGTATGCAATTTCCTTGTGCTCCCACTTAATTATTTTGGAAAAGAGATGCAA
CGTCACCAAATTCCAGCTGAGACATTGGAGGTATTCACCATTGTGAATGTTGAGGAAGGG
TCAAGATGGCTTTGGGCTCACTGCTTTGCGCTGTACCTCATATCGTGCTGTGCTTGTTTT
CTTCTTTACCTTGAGTACAAAAGTATTTCAAGGATGAGGCTGGCTTACTTTACTTCATCT
GTTTCCAACCCAAGTTACTTCACAGTTCTTGTTCGTGCCATCCCATGGTCACGACAAGAA
TCATACAGTGGAACAGTGACAAGATTCTTCACAAATTTCTATGCATCAAGTTATTTATCT
CATCAAATCGTTTATCGATCTGGCTCTGTTCAGAAACTGGTGACTGATGCAGGGAAGATG
TGCAAGATGCTGAAACTGACACCTAGGGAACTACATTGTGGATCAAGTTCCATGAGATGT
GGCCTTTGTGGAACAACAGCATCATTTAGTATGCTTCCCATGGAGGCGGAAACTGACAAA
GGAAGAAGTGATTTTGACGGTTCAGATTTGAGGAAAAAGGAGTCTGCAGCTGCTTTAGTT
TTTTTCAGGAATCGCTATGCTGCTTTGGTTGCTTCTCAGGGTCTTCAATCTCGAAATCCC
ATGTCATGGGTCACAGATCTTTCTCCAGAACCAGACGATATGTATTGGTCAAACATTTGT
GTCCCGTATAGACTCCTTTGGATCCGCAAAATAGCTATTCTTGTGGCCTCGATGGCTTTG
GTGGCATTTTTCATTGTGCCTGTTTCATTAACACAAGGTCTTGTTCACCTCGACAAGCTT
CAGAAGACATTTCCATTTCTTAGAGGAATTTTACAGAGGAAAGCAATGAGTCAGCTGGCT
ACGGGATATCTACCAAGTGTCGTGTTAATAATATTTATGTACATGGTTCCTCCAATAATG
TTGTTATTTTCTACAATGGAAGGCTCTATCTCTCGTAGTGACAGGAAGAGGAGTGCTTGC
ATAAAAGTTTTGTGTTTCTTCATCTGGAATGTTTTCTTTGGTAACATCCTCTCGGGGTCT
GTGATCGAGAGGTTCTCTAAGTTTTTTAAGGATGTAAAAAACCTACTTGCAACAGCAGTG
CCATCAACGGCCACCTTTTTTATGACTTATGTTTTGACATCAGGCTGGGCAAGTCTATCA
TGTGAACTCATGCAACCATTTGGTCTACTCTGCAACTTATTCTATAGATTTGTTCTCAGA
AACAAGGATGTCTCTACATACGGCACATTGACTTTTCCATACCATACAGAAGTTCCAAGG
ATCCTTCTATTTGGGCTTTTTGGCTTTGTGTATTCCACATTGTCTCCTTTGATACTGCCA
TTCTTGCTGGTTTATCTTTCCCTTGCCTACCTTGTATACCGTAATCAG

Peptide Sequence

PEP ID

XP_016489440.1
PEP Infomation

PREDICTED: CSC1-like protein RXW8, partial [Nicotiana tabacum]
Sequence

MKLAALLTSAGVNTAVCVVLFSLYSVLRKQPSFVNVYFGAKIAQVRARQQDAFRFDRFVP
SPSWILKAWETSDEEISATGGLDAVVFVRMIVFSFRIFSIAAIVCNFLVLPLNYFGKEMQ
RHQIPAETLEVFTIVNVEEGSRWLWAHCFALYLISCCACFLLYLEYKSISRMRLAYFTSS
VSNPSYFTVLVRAIPWSRQESYSGTVTRFFTNFYASSYLSHQIVYRSGSVQKLVTDAGKM
CKMLKLTPRELHCGSSSMRCGLCGTTASFSMLPMEAETDKGRSDFDGSDLRKKESAAALV
FFRNRYAALVASQGLQSRNPMSWVTDLSPEPDDMYWSNICVPYRLLWIRKIAILVASMAL
VAFFIVPVSLTQGLVHLDKLQKTFPFLRGILQRKAMSQLATGYLPSVVLIIFMYMVPPIM
LLFSTMEGSISRSDRKRSACIKVLCFFIWNVFFGNILSGSVIERFSKFFKDVKNLLATAV
PSTATFFMTYVLTSGWASLSCELMQPFGLLCNLFYRFVLRNKDVSTYGTLTFPYHTEVPR
ILLFGLFGFVYSTLSPLILPFLLVYLSLAYLVYRNQ

Transcript Sequence

Gene sequence data has not been registered.